Atlases

4D Neonatal Brain Atlas

  • 204 subjects
  • Age range 28-44 weeks post-menstrual age 
  • T1 weighted templates
  • T2 weighted templates
  • Probability maps (brain mask, cortex, white matter, subcortical gray matter, csf, brainstem and cerebellum)​​
  • The following publications should be referenced when using this atlas:
    • Serag, A., Aljabar, P., Ball, G., Counsell, S.J., Boardman, J.P., Rutherford, M.A., Edwards, A.D., Hajnal, J.V. & Rueckert, D. Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression. Neuroimage, 59 (3), 2255-2265 (2012).​
    • Serag, A., Kyriakopoulou, V., Rutherford, M.A., Edwards, A.D., Hajnal, J.V., Aljabar, P., Counsell, S.J., Boardman, J.P. & Rueckert, D. A Multi-channel 4D Probabilistic Atlas of the Developing Brain: Application to Fetuses and Neonates. Annals of the BMVA 2012, 3, 1-14 (2012).
  • Note that tissue probability maps can be used with both T1 and T2 templates

4D Fetal Brain Atlas

  • 80 subjects
  • Age range 23-37 weeks of gestation
  • T2 weighted templates
  • Probability maps (brain mask, cortex, hemispheres, csf and ventricles)​​
  • The following publications should be referenced when using this atlas:
    • Serag, A., Aljabar, P., Ball, G., Counsell, S.J., Boardman, J.P., Rutherford, M.A., Edwards, A.D., Hajnal, J.V. & Rueckert, D. Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression. Neuroimage, 59 (3), 2255-2265 (2012). ​
    • Serag, A., Kyriakopoulou, V., Rutherford, M.A., Edwards, A.D., Hajnal, J.V., Aljabar, P., Counsell, S.J., Boardman, J.P. & Rueckert, D. A Multi-channel 4D Probabilistic Atlas of the Developing Brain: Application to Fetuses and Neonates. Annals of the BMVA 2012, 3, 1-14 (2012). 
  • Note that the compressed file includes T2 templates and tissue probability maps

Algorithms

If any of the previously published algorithms or methodologies by our center are of interest, please do not hesitate to contact us, and we will be more than happy to provide assistance.